Leukemia Gene Fusion Detection with Interpretation
Label Mnemonic: | HEMELEUK |
Epic code: | LAB8916 |
Downtime form: | Doctor/Provider Orders - Pathology Molecular |
Molecular Pathology
6240 RCP
384-9568
6240 RCP
384-9568
Specimen(s):
Blood, Bone Marrow Aspirate, Tissue
Specimen
Instructions:
Testing requires dedicated collection tube.
Collection Medium:
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Pink top tube 6 mL (K2-EDTA) |
Minimum:
Whole blood (EDTA anti-coagulated; 6 mL pink top tube) or bone marrow aspirate (EDTA anti-coagulated; pink or lavender top tube) or tissue formalin fixed and paraffin embedded.
Rejection Criteria:
Tumor specimens containing less than 20% tumor cells may be
unacceptable.
Delivery Instructions:
Store and send whole blood refrigerated. DO NOT CENTRIFUGE.
Testing Schedule:
Testing is batched.
Turn Around
Time:
7-10 days upon receipt in laboratory
Comments:
Testing is used for identification and characterization of lymphoid and myeloid malignancies as defined by the World Health Organization (WHO) 2017 Classification of Tumors of Hematopoietic and Lymphoid Tissues. It involves RNA next generation sequencing (NGS) using Anchored Multiplex Amplification and NGS of 42 target genes.
This assay is used to detect these alternative RNA fusions and variants in the following genes: ABL1, ABL2, BLNK, CBFB, CBL, CCND2, CRLF2, CSF1R, DGKH, DNTT, DUSP22, EPOR, ETV6, FGFR1, FLT3, IKZF1, IL2RB, IRF4, JAK2, JAK3, KMT2A, LYN, MECOM, MKL1, MYH11, NTRK3, NUP214, NUP98, PBX1, PDGFRA, PDGFRB, PML, PTK2B, RARA, RBM15, RUNX1, RUNX1T1, SH2B3, TCF3, TP63, TSLP, and TYK.
Results Reported: Fusion or variants detected.
This assay is used to detect these alternative RNA fusions and variants in the following genes: ABL1, ABL2, BLNK, CBFB, CBL, CCND2, CRLF2, CSF1R, DGKH, DNTT, DUSP22, EPOR, ETV6, FGFR1, FLT3, IKZF1, IL2RB, IRF4, JAK2, JAK3, KMT2A, LYN, MECOM, MKL1, MYH11, NTRK3, NUP214, NUP98, PBX1, PDGFRA, PDGFRB, PML, PTK2B, RARA, RBM15, RUNX1, RUNX1T1, SH2B3, TCF3, TP63, TSLP, and TYK.
Results Reported: Fusion or variants detected.
Methodology:
Reverse transcription, anchored multiplexed PCR for targeted next-generation sequencing is performed on RNA isolated from bone marrow, blood or formalin-fixed paraffin embedded tissue.
CPT Code:
81450