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University of Iowa Diagnostic Laboratories (UIDL) Test Directory 319-384-7212 (local) 1-866-844-2522 (toll free) |
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| Calpain 3 Sequencing | Order Code: CAPN
Order Form: Muscular Dystrophy Molecular Genetics Requisition |
Specimen: |
Whole Blood | ||
Collection Medium: |
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Minimum: |
Adult minimum: 3 mL whole blood in lavender top (EDTA) tube. Children minimum: 2 mL whole blood in lavender top (EDTA) tube. Optional specimen type: Formalin Fixed paraffin embedded tissue; Fresh Frozen tissue. Testing on smaller volumes than those requested will be attempted. However, in some cases, small blood volumes may compromise the ability to perform testing. | ||
Rejection Criteria: |
Testing requires a dedicated collection tube. | ||
Testing Schedule: |
Weekly | ||
Analytic Time: |
21 days | ||
Reference Range: |
Normal | ||
Interpretive Data: |
Mutations in the calpain-3 gene (CAPN3) cause autosomal recessive limb-girdle muscular dystrophy type 2A (LGMD2A). Sequence analysis of CAPN3 is accomplished in a tiered approach. The first tier involves testing 14 CAPN3 exons which, collectively, capture 83% of reported mutations. If tier 1 testing yields normal or inconclusive results the remaining 10 CAPN3 exons are analyzed. | ||
Methodology: |
Sequence Analysis of the coding region of the CAPN3 gene. | ||
Sample Processing: |
Lavender tube is sent as whole blood, no processing necessary. | ||
Sample Storage: |
Room temperature for up to 24 hours, then refrigerate the whole blood if it is necessary to be held overnight, or weekends, or holidays. | ||
Transport Instructions: |
Place specimen into styrofoam container, seal container. DO NOT FREEZE, protect specimen by wrapping in bubble-wrap or toweling. Recommend express mail or equivalent if not on courier service. Ship at ambient temperature. | ||
CPT Code: |
1st tier: 83912, 83890, 83901(x7), 83904(x7); 2nd tier: 83901(x10), 83904(x10); if paraffin block or fresh tissue is submitted, remove CPT code 83890 and add 83907. |
Updated: 06/06/2008