The University of Iowa (UIHC)
Department of Pathology
LABORATORY SERVICES HANDBOOK


Rett Syndrome Sequencing
Order Code: RETTS
Order Form: A-1a Miscellaneous Request or IPR Req
  Commercial "Mail-out" Laboratory
6240 RCP
356-3527
Specimen
Whole Blood
Collection Medium:
Pink top tube (EDTA sprayed)
Alternate
Collection Media:
Lavender top tube (EDTA)
Minimum:
Adult minimum: Collect TWO 6 mL pink top (EDTA sprayed) tubes
Child minimum: Collect one FULL 6 mL pink top (EDTA sprayed) tube
Infant minimum: 2-4 mL whole blood from pink top (EDTA sprayed) tube

Please contact the laboratory for specific requirements for prenatal 
testing.
Analytic Time:
3 weeks
Comments:
Please print, complete, and submit the following form with the 
appropriate signatures, the correct sample type and the A-1a 
Miscellaneous Request:

Gene Sequencing (SEQ) Requisition from Bayler College of Medicine 
(BCM) Medical Genetics Laboratories.
Test
Limitations:
Rett syndrome is an X-linked neurodevelopmental disorder caused by 
mutations in the MECP2 gene which encodes the Methyl CpG Binding 
Protein 2 transcriptional repressor. Rett syndrome affects ~1 in 10,000 
females with symptoms including loss of speech and purposeful hand use, 
microcephaly, seizures, ataxia, and stereotypic hand movements. MECP2 
mutations manifest a broader spectrum of clinical phenotypes in female 
and rare male patients, with features overlapping with other mental 
retardation disorders. Mutations in the MECP2 coding region can be 
detected by sequence analysis in up to ~85% of Rett cases.

Sequencing has an analytical sensitivity of ~99% for point mutations. 
Up to ~85% of classic Rett patients have MECP2 gene mutations that can 
be identified by sequencing.
Methodology:
DNA Sequencing of MECP2 exons 1 through 4 in both directions using a 
96-capillary sequencer.
CPT Code:
83904x7, 83912, 83909x14, 83898x10, 83894, 83891

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Updated: 04/23/2008

Note: The information contained in this handbook is for use by personnel of University of Iowa Health Care. No other use is implied or intended.