MSTP Student Publications
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MSTP Students engage in a variety of research areas. Below are MSTP student publications sorted by students' last name, alphabetically by year of publication.
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2010
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SM Ebert, A Mas Monteys, DK Fox, KS Bongers, BE Shields, SE Malmberg, BL Davidson, M Suneja, and CM Adams.
The transcription factor ATF4 promotes skeletal myofiber atrophy during fasting. Mol Endocrinol. 2010 Mar 2. [Epub ahead of print] PMID: 20197309 -
Glasgow JM, Kaboli PJ
Detecting adverse drug events through data mining. American Journal of Health-Systems Pharmacy, 2010,67:4 317-20. PMID: 20133538Recober A, Kaiser EA, Kuburas A, Russo AF.
Induction of multiple photophobic behaviors in a transgenic mouse sensitized to CGRP. Neuropharmacology. 2010 Jan;58(1):156-65. Epub 2009 Jul 14. PMID: 19607849 -
2009
Alford, SK and Hoffman EA.
Measurement of Pulmonary Blood Distribution and Vasculature Structure by NMR and 4D X-ray CT. Textbook of Pulmonary Vascular Disease. Springer 2009. -
Collins M, Tremblay M, Chapman N, Curtiss M, Rothman PB, Houtman JC.
The T cell receptor-mediated phosphorylation of Pyk2 tyrosines 402 and 580 occurs via a distinct mechanism than other receptor systems. J Leukoc Biol. 2009 Dec 22. PMID: 20028775 -
Ettinger NA, Duggal P, Braz RFS, Nascimento ET, Beaty TH, Jeronimo SMB, Pearson RD, Blackwell JM, Moreno L, Wilson ME.
Genetic Admixture in Brazilians Exposed to Infection with Leishmania chagasi. Annals of Human Genetics 2009.73:304–313. PMID: 19397557 -
Fineberg SK, Kosik KS, Davdison B.
microRNAs potentiate neural development. Neuron. 2009 Nov 12;64(3):303-9.Review.PMID: 19914179 -
Jongeling AC, Johns ME, Murphy AZ, Hammond DL.
Persistent inflammatory pain decreases the antinociceptive effects of the mu opioid receptor agonist DAMGO in the locus coeruleus of male rats. Neuropharmacology. 2009 Mar 3. [Epub ahead of print] PMID: 19265713 -
Khalsa SS, Rudrauf D, Sandesara C, Olshansky B, Tranel D.
Bolus isoproterenol infusions provide a reliable method for assessing interoceptive awareness. Int J Psychophysiol. 2009. 72: 34-45. PMID: 18854201 -
Mohr EL, Stapleton JT.
GB virus type C interactions with HIV: the role of envelope glycoproteins. J Viral Hepat. 2009 Sep 15. PMID: 19758271 -
Oakley FD, Smith RL, Engelhardt JF.
Lipid rafts and caveolin-1 coordinate interleukin-1beta (IL-1beta)-dependent activation of NFkappaB by controlling endocytosis of Nox2 and IL-1beta receptor 1 from the plasma membrane. J Biol Chem. 2009 Nov 27;284(48):33255-64. Epub 2009 Oct 1. PMID: 19801678 -
Li Q, Spencer NY, Oakley FD, Buettner GR, Engelhardt JF.
Endosomal Nox2 Facilitates Redox-Dependent Induction of NFkB by TNFa. Antioxid Redox Signal. 2009 Jun;11(6):1249-63. PMID: 19113817 -
Oakley FD, Abbott D, Li Q, Engelhardt J.
Signaling Components of Redox Active Endosomes: The Redoxosomes. Antioxid Redox Signal. 2009 Jun; 11(6):1313-33. Review PMID: 19072143 -
Peters AL, Stunz LL, Bishop GA.
CD40 and autoimmunity: the dark side of a great activator. Semin Immunol. 2009 Oct;21(5):293-300. Review. PMID: 19595612 -
Rai D, Pham NL, Harty JT, Badovinac VP.
Tracking the total CD8 T cell response to infection reveals substantial discordance in magnitude and kinetics between inbred and outbred hosts. J Immunol. 2009 Dec 15;183(12):7672-81. Epub. PMID: 19933864 -
Pham NL, Badovinac VP, Harty JT.
A Default Pathway of Memory CD8 T Cell Differentiation after Dendritic Cell Immunization Is Deflected by Encounter With Inflammatory Cytokines During Antigen-Driven Proliferation. J Immunol. 2009 Aug 15;183(4):2337-48. Epub 2009 Jul 27. PMID: 19635915 -
Wirth TC, Pham NL, Harty JT, Badovinac VP.
High initial frequency of TCR-transgenic CD8 T cells alters inflammation and pathogen clearance without affecting memory T cell function. Molecular Immunology. 2009 Feb 3. [Epub ahead of print]. PMID: 19195704. -
Philpa AR, Jin M, Li S, Schindler EI, Iannoccone A, Lam BL, Wleber, RG, Fishman GA, Jacobson SG, Mullins RF, Travis, GH, Stone, EM.
Predicting the Pathogenicity of RPE65 Mutations. Human Mutation. 2009 Aug; 30 (8): 1183-8. PMID: 19431183Schulert GS, McCaffrey RL, Buchan BW, Lindemann SR, Hollenback C, Jones BD, Allen LA. Francisella tularensis genes required for inhibition of the neutrophil respiratory burst and intramacrophage growth identified by random transposon mutagenesis of strain LVS. Infect Immun. 2009.Apr;77(4):1324-36. PMID: 19204089
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Maeda Y, Sheffield AM, Smith RJ.
Therapeutic regulation of gene expression in the inner ear using RNA interference. Review. Adv Otorhinolaryngol. 2009;66:13-36. Epub 2009 Jun 2. PMID: 19494570 -
Smith RJH, Sheffield AM, and Van Camp G, (updated April 2009)
Nonsyndromic Hearing Loss and Deafness; in GeneReviews at GeneTests: Medical Genetics Information Resource [database online]. Copyright, University of Washington, Seattle. 1997-2009 Available at http://www.genetests.org.Tabayoyong WB, Salas JG, Bonde S, Zavazava N.
HOXB4-transduced embryonic stem cell-derived Lin-c-kit+ and Lin-Sca-1+ hematopoietic progenitors express H60 and are targeted by NK cells. Journal of Immunology.2009. 183(9):5449-57. PMID: 19828634 -
Tabayoyong WB, Zavazava N.
Meet the inlaws: embryonic stem cell derivatives meet the immune system. Cell Research. Cell Res. 2009.19(4):397-8. PMID: 19339976 -
Thoendel M, Horswill AR.
Identification of Staphylococcus aureus AgrD residues required for autoinducing peptide biosynthesis. J Biol Chem. 2009 Aug;284(33)21828-38. PMID: 19520867 -
Malone CL, Boles BR, Lauderdale KJ, Thoendel M, Kavanaugh JS, Horswill AR.
Fluorescent reporters for Staphylococcus aureus. J Microbiol Methods. 2009 Jun;77(3):251-60. PMID: 19264102Anghelina D, Zhao J, Trandem K, Perlman S.
Role of regulatory T cells in coronavirus-induced acute encephalitis. Virology. 2009 Mar 15;385(2):358-67. PMID: 19141357 -
Wang SY, Veeramani S, Racila E, Cagley J, Fritzinger DC, Vogel CW, St John W, Weiner GJ.
Depletion of the C3 component of complement enhances the ability of rituximab-coated target cells to activate human NK cells and improves the efficacy of monoclonal antibody therapy in an in vivo model. Blood. 2009 Dec 17;114(26):5322-30. Epub 2009 Oct 5.PMID: 19805620 -
Williams AJ, Knutson TM, Colomer Gould VF, Paulson HL.
In vivo suppression of polyglutamine neurotoxicity by C-terminus of Hsp70 interacting protein (CHIP) supports an aggregation model of pathogenesis. Neurobiol. Dis.,2009.33: 342-353 PMID: 19084066 -
Coryell MW, Wunsch AM, Haenfler JM, Allen JE, Schnizler M, Ziemann AE, Cook MN, Dunning JP, Price MP, Rainier JD, Liu Z, Light AR, Langbehn DR, Wemmie JA. 2009
Acid-sensing ion channel-1a in the amygdala, a novel therapeutic target in depression-related behavior. J Neurosci. 2009 Apr 29;29(17):5381-8. PMID: 19403806 -
2008
Ziemann AE, Allen JE, Dahdaleh NS, Drebot II, Coryell MW, Wunsch AM, Lynch CM, Faraci FM, Howard MA 3rd, Welsh MJ, Wemmie JA.
The amygdala is a chemosensor that detects carbon dioxide and acidosis to elicit fear behavior. Cell. 2009 Nov 25;139(5):1012-21. PMID: 19945383
Boes A.D., Bechara A., Tranel D., Anderson S. W., Richman L., and Nopoulos P.
Right ventromedial prefrontal cortex: a neuroanatomical correlate of impulse control in boys. Social Cognitive and Affective Neuroscience. Soc Cogn Affect Neurosci. 2008 Oct 19.
Boes A.D., Tranel D., Anderson S.W., and Nopoulos P.
Right anterior cingulate cortex volume is a neuroanatomical correlate of aggression and defiance in boys. Behavioral Neuroscience, 2008;122(3):677-84.
Friemann, R, K Lee, EN Brown, DT Gibson, H Eklund, S Ramaswamy.
Structural basis for electron transfer in multicomponent Rieske non-heme iron toluene dioxygenase enzyme system (2008). Acta Crystallogr D Biol Crystallogr.
Brown, EN, R Friemann, A Karlsson, JV Parales, MMJ Couture, LD Eltis, and S Ramaswamy. Determining Rieske cluster reduction potentials. 2008; J Biol Inorg Chem 13, 1301
Brown, EN.
Removing bias from solvent atoms in electron density maps. 2008; J Applied Crystallography 41. 761-7
Chang M, Lim M, Cooper JD, Sleat DE, Cheng SH, Lobel P, Davidson BL.
Intraventricular enzyme replacement improves disease phenotypes in a mouse model of late infantile neuronal ceroid lipofuscinosis. Molecular Therapy. 2008;Apr;16(4):49-56.
Dickson, M,Tian X, Liu X, Davis D, Sigmund C.
Upstream Stimulatory Factor is Required for Human Angiotensinogen Expression and Differential Regulation by the A-20C Polymorphism. Circ Res 2008;103(9):940-7.
Ettinger NA, Wilson ME.
Macrophage and T-Cell Gene Expression in a Model of Early Infection with the Protozoan Leishmania chagasi. PLoS Negl Trop Dis. 2008 Jun 25;2(6):e252.
Bartlett JA, Fisher AJ, McCray PB Jr.
Innate immune functions of the airway epithelium. Contrib Microbiol. 2008;15:147-63.
Fischer AJ, Goss KL, Scheetz TE, Wohlford-Lenane CL, Snyder JM, McCray Jr PB.
Differential Gene Expression in Human Conducting Airway Surface Epithelia and Submucosal Glands. Am J Respir Cell Mol Biol. 2008 Aug 14.
Glasgow JM, Salem AK.
Stem Cells and Cancer, Encyclopedia of Stem Cell Research, Review. 2008.
Intra J., Glasgow J.M., Mai H.Q., Salem A.K..
Pulsatile release of DNA from polydimethylsiloxane (PDMS) chips with hydrolytically degradable seals, J. Controlled Release, 2008;127(3): 280-7.
Beyer AM, Baumbach GL, Halabi CM, Modrick ML, Lynch CM, Gerhold TD, Ghoneim SM, de Lange WJ, Keen HL, Tsai YS, Maeda N, Sigmund CD, Faraci FM.
Interference with PPARgamma signaling causes cerebral vascular dysfunction, hypertrophy, and remodeling. Hypertension. 2008 Apr;51(4):867-71.
Halabi CM, Beyer AM, de Lange WJ, Keen HL, Baumbach GL, Faraci FM, Sigmund CD.
Interference with PPAR gamma function in smooth muscle causes vascular dysfunction and hypertension. Cell Metab. 2008 Mar;7(3):215-26.
de Lange WJ ,Halabi CM, Beyer AM, Sigmund CD.
Germ line activation of the Tie2 and SMMHC promoters causes noncell-specific deletion of floxed alleles. Physiol Genomics. 2008 Sep 17;35(1):1-4.
Beyer AM, de Lange WJ, Halabi CM, Modrick ML, Keen HL, Faraci FM, Sigmund CD.
Endothelium-specific interference with peroxisome proliferator activated receptor gamma causes cerebral vascular dysfunction in response to a high-fat diet. Circ Res. 2008 Sep 12;103(6):654-61. Epub 2008 Jul 31.
Xiang J, McLinden JH, Chang Q, Jordan (Mohr) EL, Stapleton JT.
Characterization of a peptide domain within the GB virus C NS5A phosphoprotein that inhibits HIV replication. PLoS ONE. 2008 Jul 2;3(7):e2580.
Khalsa SS, Rudrauf D, Damasio AR, Davidson RJ, Lutz A, Tranel D.
Interoceptive awareness in experienced meditators. Psychophysiology. 2008.45(4):671-7. PMID: 18503485
Marden JJ, Zhang Y, Oakley FD, Zhou W, Lou M, Jia HP, McCray PB Jr, Yaniv M, Weitzmanm JB, Engelhardt JF.
JunD protects the liver from ischemia/reperfusion injury by dampening AP-1 transcriptional activation. J Biol Chem. 2008 Jan 8.
Khalsa SS, Rudrauf D, Sandesara C, Olshansky B, Tranel D.
Bolus isoproterenol infusions provide a reliable method for assessing interoceptive awareness. Int J Psychophysiol. 2008 Sep 27
Khalsa SS, Rudrauf D, Damasio AR, Davidson RJ, Lutz A, Tranel D.
Interoceptive awareness in experienced meditators.
Psychophysiology. 2008 Jul;45(4):671-7. Epub 2008 May 20.
Glenn, KA, Nelson RF, Wen H, Zhou Z, Paulson, HL.
Diversity in tissue expression, substrate binding, and SCF complex formation for a lectin family of ubiquitin ligases. J Biol Chem. 2008 May 9;283(19):12717-29.
Oakley FD, Abbott D, Li Q, Engelhardt J.
Signaling Components of Redox Active Endosomes: The Redoxosomes. Antioxid Redox Signal. 2008 Dec 11. PMID: 19072143
Marden JJ, Zhang Y, Oakley FD, Zhou W, Luo M, Jia HP, McCray PB Jr, Yaniv M, Weitzman JB, Engelhardt JF.
JunD protects the liver from ischemia/reperfusion injury by dampening AP-1 transcriptional activation. J Biol Chem. 2008 Mar 14;283(11):6687-95.
Peters AL, Plenge RM, Graham RR, Altshuler DM, Moser KL, Gaffney PM, and Bishop GA.
A novel polymorphism of the human CD40 receptor with enhanced function. Blood. 2008;112:1863-1871.
Ramme AJ, Devries N, Kallemeyn NA, Magnotta VA, Grosland NM.
Semi-automated Phalanx Bone Segmentation Using the Expectation Maximization Algorithm. J Digit Imaging. 2008 Sep 3
Gassman EE, Powell SM, Kallemeyn NA, Devries NA, Shivanna KH, Magnotta VA, Ramme AJ, Adams BD, Grosland NM.
Automated bony region identification using artificial neural networks: reliability and validation measurements. Skeletal Radiol. 2008 Apr;37(4):313-9.
Hildebrand MS, Newton SS, Gubbels SP, Sheffield AM, Kochhar A, de Silva MG, Dahl HH, Rose SD, Behlke MA, Smith RJ.
Advances in molecular and cellular therapies for hearing loss. Mol Ther. 2008;16(2):224-36.
Sprague DL, Elzey BD, Crist SA, Waldschmidt TJ, Jensen RJ, Ratliff TL.
Platelet-mediated modulation of adaptive immunity: unique delivery of CD154 signal by platelet-derived membrane vesicles. Blood. 2008 May 15;111(10):5028-36.
Crist SA, Sprague DL, Ratliff TL.
Nuclear factor of activated T cells (NFAT) mediates CD154 expression in megakaryocytes. Blood. 2008 Apr 1;111(7):3553-61.
Bonde S, Dowden A, Chan KM, Tabayoyong WB, Zavazava N.
HOXB4 but not BMP4 confers self-renewal properties to ES-derived hematopoietic progenitor cells. Transplantation. 2008.86(12):1803-9. PMID: 19104426
Zhuravleva MA, Trandem K, Sun PD.
Structural implications of Siglec-5-mediated sialoglycan recognition. J Mol Biol. 2008 Jan 11;375(2):437-47.
Wang SY, Weiner G
Complement and cellular cytotoxicity in antibody therapy of cancer. Expert Opin Biol Ther. 2008 Jun;8(6):759-68.
Harraz MM, Marden JJ, Zhou W, Zhang Y,Williams A, Sharov VS, Nelson K, Luo M, Paulson H, Schöneich C, Engelhardt JF.
SOD1 mutations disrupt redox-sensitive Rac regulation of NADPH oxidase in a familial ALS model. J Clin Invest. 2008;118: 659-670.
Winborn BJ, Travis SM, Todi SV, Scaglione KM, Xu P,Williams AJ, Cohen RE, Peng J, Paulson HL.
The deubiquitinating enzyme ataxin-3, a polyglutamine disease protein, edits Lys63-linkages in mixed linkage ubiquitin chains. J. Biol. Chem. 2008;283: 26436-26443.
Williams AJ, Paulson HL.
Polyglutamine neurodegeneration: protein misfolding revisited. Trends Neurosci. 2008 Oct;31(10):521-8. Epub 2008 Sep 6.
Ziemann AE, Schnizler MK, Albert GW, Severson MA, Howard Iii MA, Welsh MJ, Wemmie JA
Seizure termination by acidosis depends on ASIC1a. Nat Neurosci. 2008 Jul;11(7):816-22. Epub 2008 Jun 8.